PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00898.1.p
Common NameMIMGU_mgv1a025718mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 484aa    MW: 52454.2 Da    PI: 6.5114
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00898.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.86.2e-30185244159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       ++Dg++WrKYGqK  kg+++pr+YYrCt + +Cpv+k+v+r+ +d +++++tYeg Hnh+
  Migut.H00898.1.p 185 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSpTCPVRKQVQRCMDDMSILITTYEGAHNHP 244
                       58**************************999****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-31170246IPR003657WRKY domain
SuperFamilySSF1182903.79E-27178246IPR003657WRKY domain
PROSITE profilePS5081128.415180246IPR003657WRKY domain
SMARTSM007743.7E-36185245IPR003657WRKY domain
PfamPF031061.4E-26186244IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MIMQEDNNHD EVESTKLEME GVREENVRLK TLLQQIESDY KALQMRFTRI YRKDGDDEFN  60
YKILIESPIL NSAFAEEEIN NTGGGGDDDE ELELVSLRLG TSPPISDERA KKAAVVNNNI  120
NILEGGLNRS CVSLTGGKKE SSSPPTSNVS MKTQRSGEDG ELISQTSLVK RARVCVRARC  180
DTPTMNDGCQ WRKYGQKIAK GNPCPRAYYR CTVSPTCPVR KQVQRCMDDM SILITTYEGA  240
HNHPLPMSAT AMASTTSAAA SMLLSGSSST SQPPSATASP PPPPNMYGPP PPSTFRPYDH  300
NSRSITAAQP SYFLPQYNSP STPFPTITLD LTTNPSAAAY GGFGLYSSTT NNTSRNNNIP  360
RVSPTSLNFS SGGGIFSHGT TTAFPYRNDQ HHYSLLPEKP AHEQHEYRSY LEKFNQASSQ  420
QALTETLTKV ITSDASFRSV IAAAISTMTA NNNGGGEIGG GGPNLKWGGG DQHIPATDSN  480
QLT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-20172246174WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012841381.10.0PREDICTED: probable WRKY transcription factor 72
TrEMBLA0A022R2B60.0A0A022R2B6_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA128051921
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.17e-39WRKY DNA-binding protein 72